Software Packages and Documentations

PYTHON

https://docs.python.org/3/

• The Software Carpentry Python lessons

  o Plotting and Programming in Python

  https://swcarpentry.github.io/python-novice-gapminder/\
  
  

  o Programming with Python

  https://swcarpentry.github.io/python-novice-inflammation/
  
  

• The Hitchhiker’s Guide to Python!

  o https://docs.python-guide.org/

  
  

GROMACS

http://www.gromacs.org/Documentation_of_outdated_versions

MDAnalysis

https://userguide.mdanalysis.org/stable/index.html

VMD molecular visualization program

Https://www.ks.uiuc.edu/Research/vmd/current/docs.html#tutorials

PYMOL

https://pymol.org/dokuwiki/doku.php?id=

BOOKS